Nephroselmis sp. RCC3064
Access to genome browser and other tools for the genome - Pending
Resampling required
Sample collected
Sample acquired
Data generation
In assembly
Submitted
Insdc open
- Scientific name accepted: Nephroselmis
- Authority: F.Stein, 1878
- Phylum: Chlorophyta
- Genus: Nephroselmis
- Ploidy: Unknown
PhyloPic color code:
Species match
Genus match
Family and above match
- Collect event: CC-Roscoff
- Coordinator(s): Katell Hervéou
- Operator(s): Daniel Vaulot
- Taxonomist(s): Florence Le Gall
- Date: Jan. 1, 2012
- Site (sea): Indian Ocean
- Site (region): Île Saint-Paul
- Latitude: 38.72 / 38°43'12.0"S
- Longitude: 77.53 / 77°31'48.0"E
- ENA BioProject of the sequencing raw data: PRJEB127851
- ENA BioProject of the genome assembly: PRJEB127852
- Assembly accession: GCA_988479435
- EAR report with genome assembly metrics: PDF
- Size: 61.5 Mbp
- GC content: 73.39%
- Number of chromosomes: 28
- Number of scaffolds: 32
- N50 of scaffolds: 2.47 Mbp
- L50 of scaffolds: 10
- Number of contigs: 33
- N50 of contigs: 2.47 Mbp
- L50 of contigs: 11
- Protein-coding genes: Undetermined
- Gene length (average): Undetermined
- Gene length (median): Undetermined
- CDS length (average): Undetermined
- CDS length (median): Undetermined
- CDS proportion (genome): Undetermined
- Genes without introns: Undetermined
- Number of contigs with at least one gene (genome): Undetermined
- Number of contigs with at least one gene (bases): Undetermined
BUSCO structural annotations completeness
BUSCO v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)
Genome
- Single-copy genes: Undetermined
- Duplicated genes: Undetermined
- Fragmented genes: Undetermined
- Missing genes: Undetermined
Proteins
- Single-copy genes: Undetermined
- Duplicated genes: Undetermined
- Fragmented genes: Undetermined
- Missing genes: Undetermined